Projects per year
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Collaborations and top research areas from the last five years
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FUNIN2TRAP: The use of insect trap collection fluids for the surveillance of quarantine fungi in Belgian forests
Haegeman, A. (Researcher), Desmedt, W. (Researcher) & Heungens, K. (Project Manager)
FOD Volksgezondheid, Veiligheid van de voedselketen en Leefmilieu
1/11/25 → 31/10/27
Project: Research
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FOD METASCOL: Biosurveillance of Scolytinae using DNA metabarcoding
Haegeman, A. (ProjectSupervisor), Dermauw, W. (Project Manager), Slos, D. (Researcher), Dewitte, I. (Researcher) & Bonte, J. (Researcher)
FOD Volksgezondheid, Veiligheid van de voedselketen en Leefmilieu
1/11/25 → 31/10/28
Project: Research
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CHRYSANTENROEST: Identification and characterisation of the Avr effectorgenes in Puccinia horiana
Heungens, K. (Project Manager), Engelbeen, F. (PhD Student), Haegeman, A. (ProjectSupervisor) & Desmedt, W. (ProjectSupervisor)
Consortium Chrysantenveredelaars
1/01/25 → 15/03/29
Project: Research
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RAP-ID: Rapid molecular identification of insects without the need of primers
Maertens, F. (Researcher), Dermauw, W. (Project Manager) & Haegeman, A. (ProjectSupervisor)
FOD Volksgezondheid, Veiligheid van de voedselketen en Leefmilieu
1/12/24 → 30/11/26
Project: Research
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BIOSERVICES: Linking soil biodiversity and ecosystem functions and services in different land uses: from the identification of drivers, pressures and climate change resilience to their economic valuation
Waeyenberge, L. (Project Manager), Ebrahimi, N. (ProjectSupervisor), Haegeman, A. (ProjectSupervisor) & Valvekens, L. (Researcher)
1/09/23 → 31/08/28
Project: Research
Research output
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Detection and identification of fungal pathogens using MinION metabarcoding
Everaert, E., Slos, D., Foucart, Y., Heyneman, M., Chandelier, A. & Haegeman, A., 20-May-2025.Research output: Contribution to conference › Poster
Open AccessFile11 Downloads (Pure) -
Detection and identification of fungal pathogens using MinION metabarcoding
Everaert, E., Slos, D., Foucart, Y., Heyneman, M., Chandelier, A. & Haegeman, A., 20-May-2025.Research output: Contribution to conference › C3: Conference - meeting abstract
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Detection and identification of phloem bacteria using ONT (meta)barcoding
Everaert, E., De Jonghe, K., Haegeman, A., Slos, D., Foucart, Y. & Heyneman, M., 20-May-2025. 1 p.Research output: Contribution to conference › Poster
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Metam sodium influences the rhizosphere mycobiome more than the bulk soil mycobiome
Valvekens, L., Quataert, P., Debode, J., Bogaert, A., Ommeslag, S., Maenhout, K., Rabasse, J.-M. & Haegeman, A., 20-May-2025.Research output: Contribution to conference › Poster
Open AccessFile4 Downloads (Pure) -
Oxford nanopore sequencing using metabarcoding as detection and identification tool for ‘Candidatus Phytoplasma’ and ‘Ca. Liberibacter’ taxa
Everaert, E., De Jonghe, K., Heyneman, M., Foucart, Y., Slos, D. & Haegeman, A., Jun-2025, In: Phytopathogenic Mollicutes. 15, 1, p. 19-20 2 p.Research output: Contribution to journal › A2: International peer reviewed article (not A1-type) › peer-review
Datasets
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GBS_Phytophthora_Release1.0.0
Haegeman, A. (Creator), Zenodo, 9-Mar-2019
DOI: 10.5281/zenodo.1194927, https://zenodo.org/api/records/1194927
Dataset
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Data from: Unravelling hybridization in Phytophthora using phylogenomics and genome size estimation
Van Poucke, K. (Creator), Haegeman, A. (Creator), Goedefroit, T. (Creator), Focquet, F. (Creator), Leus, L. (Creator), Horta Jung, M. (Creator), Junker, C. (Creator), Redondo, M. (Creator), Husson, C. (Creator), Kostov, K. (Creator), Lyubenova, A. (Creator), Christova, P. (Creator), Chandelier, A. (Creator), Slavov, S. (Creator), De Cock, A. (Creator), Bonants, P. (Creator), Werres, S. (Creator), Palau, J. (Creator), Marçais, B. (Creator), Jung, T. (Creator), Stenlid, J. (Creator), Ruttink, T. (Creator) & Heungens, K. (Creator), Dryad, 2019
DOI: 10.5061/dryad.p40r314, http://datadryad.org/stash/dataset/doi:10.5061/dryad.p40r314
Dataset
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Data from: Using environmental DNA metabarcoding to monitor fish communities in small rivers and large brooks: Insights on the spatial scale of information
Van Driessche, C. (Creator), Everts, T. (Creator), Neyrinck, S. (Creator), Halfmaerten, D. (Creator), Haegeman, A. (Creator), Ruttink, T. (Creator), Bonte, D. (Creator), Brys, R. (Creator) & Forest, R. I. F. N. A. (Contributor), Dryad, 2023
DOI: 10.5061/dryad.tx95x6b2n, http://datadryad.org/stash/dataset/doi:10.5061/dryad.tx95x6b2n
Dataset
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Semi-artificial datasets as a resource for validation of bioinformatics pipelines for plant virus detection
Tamisier, L. (Contributor), Haegeman, A. (Contributor), Foucart, Y. (Contributor), Fouillien, N. (Contributor), Al Rwahnih, M. (Contributor), Buzkan, N. (Contributor), Candresse, T. (Contributor), Chiumenti, M. (Contributor), De Jonghe, K. (Contributor), Lefebvre, M. (Contributor), Margaria, P. (Contributor), Reynard, J. S. (Contributor), Stevens, K. (Contributor), Kutnjak, D. (Contributor) & Massart, S. (Contributor), Dryad, 1-Jan-2021
DOI: 10.5061/dryad.0zpc866z8, http://datadryad.org/stash/dataset/doi:10.5061/dryad.0zpc866z8 and one more link, https://zenodo.org/records/5642357 (show fewer)
Dataset
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Training materials on detection of plant viruses through high throughput sequencing - Accompanying information Kutnjak et al., Microorganisms, 2021,9, 841.
Silva, G. (Contributor), Lefebvre, M. (Contributor), Margaria, P. (Contributor), Haegeman, A. (Contributor), Tamisier, L. (Contributor), Pleško, I. M. (Contributor), Rott, M. (Contributor), Miozzi, L. (Contributor), Schumpp, O. (Contributor), Malapi-Wight, M. (Contributor), Boonham, N. (Contributor), McGreig, S. (Contributor), Chiumenti, M. (Contributor), Remenant, B. (Contributor), Kreuze, J. F. (Contributor), Massart, S. (Contributor), Jonghe, K. D. (Contributor), Kutnjak, D. (Contributor), Adams, I. (Contributor), Candresse, T. (Contributor), Rollin, J. (Contributor) & Reynard, J.-S. (Contributor), Zenodo, 28-Mar-2022
DOI: 10.5281/zenodo.6390814, https://zenodo.org/api/records/6390814
Dataset
Activities
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COST-Divas final meeting
Haegeman, A. (Speaker)
26-Nov-2018 → 28-Nov-2018Activity: Participating in or organising an event › Organisation and participation in conference
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CIOPORA Public Conference on Technical and Legal Aspects of Biotechnology in Ornamentals and Fruits
Haegeman, A. (Speaker)
26-Apr-2018Activity: Participating in or organising an event › Organisation and participation in conference
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EPPO Workshop on the use of NGS technologies for plant pest diagnostics
Haegeman, A. (Participation with poster)
22-Nov-2017 → 24-Nov-2017Activity: Participating in or organising an event › Organisation and participation in conference
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Revolutionizing Next-Generation Sequencing (2nd Edition)
Haegeman, A. (Participation with poster)
20-Mar-2017 → 21-Mar-2017Activity: Participating in or organising an event › Organisation and participation in conference
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Genomics in Agriculture, Fisheries and Food
Haegeman, A. (Speaker)
21-Apr-2016Activity: Participating in or organising an event › Organisation and participation in conference