Projects per year
Personal profile
Education/Academic qualification
ingenieur moleculaire wetenschappen
doctoraat moleculaire biologie
Doctor
Flemish Discipline list
- Development of bioinformatics software, tools and databases
- Molecular and cell biology not elsewhere classified
- Genomics
- Cell growth and development
- Microbiomes
- Genome structure and regulation
- Plant cell and molecular biology
- Other biotechnology, bio-engineering and biosystem engineering not elsewhere classified
- Computational evolutionary biology, comparative genomics and population genomics
- Plant developmental and reproductive biology
- Computational transcriptomics and epigenomics
- Agricultural plant breeding and biotechnology
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Dive into the research topics where Tom Ruttink is active. These topic labels come from the works of this person. Together they form a unique fingerprint.
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Recent external collaboration on country/territory level. Dive into details by clicking on the dots or
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GENEBECON: Capturing the potential of gene editing for a sustainable bioeconomy
Van Laere, K., De Loose, M., Delezie, E., Herman, L., Ruttink, T., Robbens, J., Allaert, S., Vereecke, E., Van Nerom, S., Mingolla, C., Claeys, B., Hostens, K., Leleu, S., Losschaert, M., Vander Linden, J., De Picker, R., Carbonelle, S., De Craecker, M., De Grande, A., Lourenço Ribeiro Alves, M., Degrave, Y., Luyckx, W., Casciaro, V., De Backer, F., Van Havermaet, A. & Van Noten, N.
1/09/22 → 31/08/25
Project: Research
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CENH3-CHIC: Creation of CENH3 haploid inducer lines and transcriptome study of CENH3 stability in Cichorium intybus
Eeckhaut, T., Baert, J., Ruttink, T., Van Laere, K. & Waegneer, E.
1/10/19 → 30/09/23
Project: Research
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BREED4KELP2FEED: Breeding kelp for efficient and sustainable utilization of marine resources
1/05/18 → 1/04/23
Project: Research
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BREEDIT: a multiplex genome editing strategy to improve complex quantitative traits in maize
Lorenzo, C. D., Debray, K., Herwegh, D., Develtere, W., Impens, L., Schaumont, D., Vandeputte, W., Aesaert, S., Coussens, G., De Boe, Y., Demuynck, K., Van Hautegem, T., Pauwels, L., Jacobs, T. B., Ruttink, T., Nelissen, H. & Inzé, D., 2-Jan-2023, In: Plant Cell. 35, 1, p. 218-238 21 p.Research output: Contribution to journal › Article › peer-review
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Genetic diversity and structure in wild Robusta coffee (Coffea canephora A. Froehner) populations in Yangambi (DR Congo) and their relation to forest disturbance
Depecker, J., Verleysen, L., Asimonyio, J. A., Hatangi, Y., Kambale, J-L., Mwanga Mwanga, I., Ebele, T., Dhed'a, B., Bawin, Y., Staelens, A., Stoffelen, P., Ruttink, T., Vandelook, F. & Honnay, O., 3-Jan-2023, In: Heredity. 130, 3, p. 145-153 9 p.Research output: Contribution to journal › Article › peer-review
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Multi-location trials and population-based genotyping reveal high diversity and adaptation to breeding environments in a large collection of red clover
Nay, M. M., Grieder, C., Frey, L. A., Amdahl, H., Radovic, J., Jaluvka, L., Palmé, A., Skøt, L., Ruttink, T. & Kölliker, R., 1-Mar-2023, In: Frontiers in Plant Science. 14, 1128823.Research output: Contribution to journal › Article › peer-review
Open Access -
SMAP design: a multiplex PCR amplicon and gRNA design tool to screen for natural and CRISPR-induced genetic variation
Develtere, W., Waegneer, E., Debray, K., De Saeger, J., Van Glabeke, S., Maere, S., Ruttink, T. & Jacobs, T. B., 31-Jan-2023, (E-pub ahead of print) In: Nucleic acids research. gkad036.Research output: Contribution to journal › Article › peer-review
Open Access -
Assessing biodiversity using high-throughput sequencing to monitor plant and soil health
Haegeman, A., Bonte, J., Debode, J., De Jonghe, K., Dermauw, W., De Tender, C., Ebrahimi, N., Heungens, K., Ruttink, T., Slos, D., Van Poucke, K., Waeyenberge, L. & Witters, J., 24-May-2022.Research output: Contribution to conference › Poster
Open AccessFile6 Downloads (Pure)
Datasets
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Supplementary information accompanying the paper "Nematodes facilitate bacterial-mediated biogeochemical processes in marine sediments: a meta-transcriptomics approach"
Guden, R. M. (Contributor), Haegeman, A. (Contributor), Ruttink, T. (Contributor), Moens, T. (Contributor), Derycke, S. (Contributor), Marine Biology Research Group-UGent, B. (Contributor) & Institute For Agricultural And Fisheries Research-Flemish Government, B. (Contributor), VLIZ-Vlaams Instituut voor de Zee, 1-Jan-2022
DOI: 10.14284/575, https://www.vliz.be/en/imis%3Fdasid=8116&doiid=732
Dataset
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Orthology guided transcriptome assembly of Italian ryegrass and meadow fescue for single nucleotide polymorphisms discovery (data set)
Steven, Y. (Contributor), Tomasz, K. (Contributor), David, K. (Contributor), Jan, B. (Contributor), Bruno, S. (Contributor), Michael, A. (Contributor), Roldán-Ruiz, I. (Contributor), Zbigniew, Z. (Contributor), Elodie, R. (Contributor), Jaroslav, D. (Contributor), Stepan, S. (Contributor) & Ruttink, T. (Contributor), Zenodo, 10-Feb-2016
DOI: 10.5281/zenodo.45855, https://zenodo.org/api/records/45855
Dataset
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Orthology guided transcriptome assembly of Italian ryegrass and meadow fescue (update data set)
Steven, Y. (Contributor), Tomasz, K. (Contributor), David, K. (Contributor), Jan, B. (Contributor), Bruno, S. (Contributor), Michael, A. (Contributor), Roldán-Ruiz, I. (Contributor), Zbigniew, Z. (Contributor), Elodie, R. (Contributor), Jaroslav, D. (Contributor), Ruttink, T. (Contributor) & Stoces, S. (Contributor), Zenodo, 10-Jun-2016
DOI: 10.5281/zenodo.55304, https://zenodo.org/api/records/55304
Dataset
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Phenotypic variation and quantitative trait loci for resistance to southern anthracnose and clover rot in red clover
Pégard, M. (Contributor), Grieder, C. (Contributor), Skøt, L. (Contributor), Vleugels, T. (Contributor), Roldán-Ruiz, I. (Contributor), Ruttink, T. (Contributor), Schubiger, F. X. (Contributor), Frey, L. A. (Contributor), Studer, B. (Contributor) & Kölliker, R. (Contributor), Zenodo, 23-May-2022
DOI: 10.5281/zenodo.6572010, https://zenodo.org/api/records/6572010
Dataset
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Data from: Unravelling hybridization in Phytophthora using phylogenomics and genome size estimation
Van Poucke, K. (Contributor), Haegeman, A. (Contributor), Goedefroit, T. (Contributor), Focquet, F. (Contributor), Leus, L. (Contributor), Horta Jung, M. (Contributor), Junker, C. (Contributor), Redondo, M. (Contributor), Husson, C. (Contributor), Kostov, K. (Contributor), Lyubenova, A. (Contributor), Christova, P. (Contributor), Chandelier, A. (Contributor), Slavov, S. (Contributor), De Cock, A. (Contributor), Bonants, P. (Contributor), Werres, S. (Contributor), Palau, J. (Contributor), Marçais, B. (Contributor), Jung, T. (Contributor), Stenlid, J. (Contributor), Ruttink, T. (Contributor) & Heungens, K. (Contributor), Dryad, 1-Jan-2019
DOI: 10.5061/dryad.p40r314, http://datadryad.org/stash/dataset/doi:10.5061/dryad.p40r314
Dataset
Activities
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Novel approaches in phylogenomics reveal extensive interspecific hybridization and polyploidization in the Genus Phytophthora
Tom Ruttink (Invited speaker)
12-Jan-2020Activity: Talk or presentation › Lecture and oral contribution
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ELIXIR Belgium All Hands meeting
Tom Ruttink (Participant)
16-Sep-2019Activity: Participating in or organising an event › Organisation and participation in conference
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GFPI Sommertagung der Abteilung Futterpflanzen
Joost Baert (Co-organisator), Tim Vleugels (Speaker), Tom Ruttink (Speaker), Hilde Muylle (Speaker) & Irene Borra Serrano (Speaker)
10-Apr-2019 → 11-Apr-2019Activity: Participating in or organising an event › Participation in workshop, seminar, course
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Elixir Training Workshop. Research Data Management & Data Stewardship: more than a FAIRytale
Tom Ruttink (Participant)
12-Dec-2019Activity: Participating in or organising an event › Participation in workshop, seminar, course
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Unraveling hybridization in the genus Phytophthora using phylogenomics and genome size estimation
Tom Ruttink (Invited speaker)
14-Jun-2019Activity: Talk or presentation › Lecture and oral contribution