Projects per year
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Dive into the research topics where Yoika Foucart is active. These topic labels come from the works of this person. Together they form a unique fingerprint.
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Collaborations and top research areas from the last five years
Recent external collaboration on country/territory level. Dive into details by clicking on the dots or
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VIRISK: Valorization of HTS output data in view of timely risk assessment of regulated or emerging plant viruses - 2023- E447
De Jonghe, K. (Project Manager), Dewitte, I. (Researcher), De Smet, M. (Project Assistant) & Foucart, Y. (Project Assistant)
1/06/24 → 30/11/26
Project: Research
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VIRBICON: Sustainable management of yellowing viruses in sugar beet
De Jonghe, K. (Project Manager), Everaert, E. (Researcher) & Foucart, Y. (Project Assistant)
1/10/22 → 30/09/26
Project: Research
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VIRTAB: Assessing the risk of whitefly transmitted viruses for Belgian crops
De Jonghe, K. (Researcher), Bonte, J. (Researcher), Haegeman, A. (Researcher), Dermauw, W. (Project Manager), Maertens, F. (Researcher), Foucart, Y. (Project Assistant), Heyneman, M. (Project Assistant) & Witters, J. (Former Researcher)
1/06/22 → 30/11/24
Project: Research
Research output
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Correction: Haegeman et al. Looking beyond Virus Detection in RNA Sequencing Data: Lessons Learned from a Community-Based Effort to Detect Cellular Plant Pathogens and Pests. Plants 2023, 12, 2139
Haegeman, A., Foucart, Y., De Jonghe, K., Goedefroit, T., Al Rwahnih, M., Boonham, N., Candresse, T., Gaafar, Y. Z. A., Hurtado-Gonzales, O. P., Kogej Zwitter, Z., Kutnjak, D., Lamovšek, J., Lefebvre, M., Malapi, M., Mavrič Pleško, I., Önder, S., Reynard, J.-S., Salavert Pamblanco, F., Schumpp, O. & Stevens, K. & 8 others, , 24-Feb-2024, In: Plants. 13, 5Research output: Contribution to journal › Article › peer-review
Open Access -
Detection and Identification of Phloem bacteria through MinION Metabarcoding
Everaert, E., De Jonghe, K., Haegeman, A., Slos, D., Heyneman, M. & Foucart, Y., 21-May-2023, (Unpublished). 1 p.Research output: Contribution to conference › Poster
File29 Downloads (Pure) -
Detection of single nucleotide polymorphisms in virus genomes assembled from high-throughput sequencing data: large-scale performance testing of sequence analysis strategies
Rollin, J., Bester, R., Brosteaux, Y., Caglayan, K., De Jonghe, K., Eichmeier, A., Foucart, Y., Haegeman, A., Koloniuk, I., Kominek, P., Maree, H., Onder, S., Posada Cespedes, S., Roumi, V., Safarova, D., Schumpp, O., Ulubas Serce, C., Somera, M., Tamisier, L. & Vainio, E. & 2 others, , 16-Aug-2023, In: PeerJ. 11, p. 1-25 25 p., 15816.Research output: Contribution to journal › A1: Web of Science-article › peer-review
Open Access -
Looking beyond Virus Detection in RNA Sequencing Data: Lessons Learned from a Community-Based Effort to Detect Cellular Plant Pathogens and Pests
Haegeman, A., Foucart, Y., De Jonghe, K., Goedefroit, T., Al Rwahnih, M., Boonham, N., Candresse, T., Gaafar, Y., Hurtado-Gonzales, O., Kogej, Z., Kutnjak, D., Lamovsek, J., Lefebvre, M., Malapi-Wight, M., Mavric-Plesko, I., Onder, S., Reynard, J.-S., Pamblanco Salavert, F., Schumpp, O. & Stevens, K. & 8 others, , 29-May-2023, In: Plants. 12, 11, p. 1-20 20 p., 2139.Research output: Contribution to journal › A1: Web of Science-article › peer-review
Open Access -
Revisiting high throughput sequencing data used for plant virus detection in order to find evidence of non-viral plant pathogens and pests
Haegeman, A., Foucart, Y., Goedefroit, T., De Jonghe, K., Al Rwahnih, M., Candresse, T., Gaafar, Y., Hurtado-Gonzales, O., Kogej, Z., Kutnjak, D., Lamovsek, J., Lefebvre, M., Malapi-Wight, M., Mavric-Plesko, I., Onder, S., Reynard, J.-S., Pamblanco Salavert, F., Schumpp, O., Stevens, K. & Pal, C. & 7 others, , 20-Aug-2023.Research output: Contribution to conference › C3: Conference - meeting abstract
Datasets
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Semi-artificial datasets as a resource for validation of bioinformatics pipelines for plant virus detection
Tamisier, L. (Contributor), Haegeman, A. (Contributor), Foucart, Y. (Contributor), Fouillien, N. (Contributor), Al Rwahnih, M. (Contributor), Buzkan, N. (Contributor), Candresse, T. (Contributor), Chiumenti, M. (Contributor), De Jonghe, K. (Contributor), Lefebvre, M. (Contributor), Margaria, P. (Contributor), Reynard, J. S. (Contributor), Stevens, K. (Contributor), Kutnjak, D. (Contributor) & Massart, S. (Contributor), Dryad, 1-Jan-2021
DOI: 10.5061/dryad.0zpc866z8, http://datadryad.org/stash/dataset/doi:10.5061/dryad.0zpc866z8 and one more link, https://zenodo.org/records/5642357 (show fewer)
Dataset