Cytogenetic techniques for physical mapping in rose

Research output

Research output per year 2011 2013 2014 2017 2018

• 8 C3: Conference Abstract
• 6 A1: Web of Science-article
• 3 Poster
• 2 Published abstract
• 2 More
  • 1 C1: Articles in proceedings
  • 1 C3: Conference - meeting abstract

Research output per year

Research output per year

Search results

• 2018

  A high-quality genome sequence of Rosa chinensis to elucidate ornamental traits

  Hibrand Saint-Oyant, L., Ruttink, T., Hamama, L., Kirov, I., Lakhwani, D., Zhou, N. N., Bourke, P. M., Daccord, N., Leus, L., Schulz, D., Van de Geest, H., Hesselink, T., Van Laere, K., Debray, K., Balzergue, S., Thouroude, T., Chastellier, A., Jeauffre, J., Voisine, L., Gaillard, S., & 21 othersBorm, T. J. A., Arens, P., Voorrips, R. E., Maliepaard, C., Neu, E., Linde, M., Le Paslier, M. C., Bérard, A., Bounon, R., Clotault, J., Choisne, N., Quesneville, H., Kawamura, K., Aubourg, S., Sakr, S., Smulders, M. J. M., Schijlen, E., Bucher, E., Debener, T., De Riek, J. & Foucher, F., 11-Jul-2018, In: Nature plants. 4, 7, p. 473-484 12 p.

  Research output: Contribution to journal › A1: Web of Science-article › peer-review

  Open Access

  • doubled haploids 100%
  • container-grown plants 52%
  • genetic markers 31%
  • genomics 26%
• 2017

  Building bridges: integrating in situ Hi-C and molecular cytogenetics to reconstruct Rosa wichurana pseudochromosomes

  Ruttink, T., Kirov, I., De Keyser, E., De Riek, J., Leus, L., Haegeman, A., Bendahmane, M., Liu, C. & Van Laere, K., 15-Jan-2017. 1 p.

  Research output: Contribution to conference › Published abstract

  • pachytene stage 100%
  • genomics 26%

• DRAWID: user-friendly java software for chromosome measurements and idiogram drawing

  Kirov, I., Khrustaleva, L., Van Laere, K., Soloviev, A., Meeus, S., Romanov, D. & Fesenko, I., Nov-2017, In: Comparative Cytogenetics. 11, 4, p. 747 757 p.

  Research output: Contribution to journal › A1: Web of Science-article › peer-review

  Open Access

• FISH-guided genome assembly in Rosa wichurana

  Van Laere, K., Kirov, I., De Keyser, E., De Riek, J., Leus, L., Haegeman, A., Liu, C. & Ruttink, T., 2017.

  Research output: Contribution to conference › C3: Conference - meeting abstract › peer-review

• The next generation of molecular markers in plant sciences

  Haegeman, A., De Keyser, E., De Riek, J., Heungens, K., Kirov, I., Leus, L., Maes, M., Muylle, H., Roldán-Ruiz, I., Van Glabeke, S., Van Huylenbroeck, J., Van Laere, K., Van Poucke, K., Verwimp, C. & Ruttink, T., 2017.

  Research output: Contribution to conference › Poster

  Open Access

  File
  159 Downloads (Pure)
• 2016

  Towards a FISH-based karyotype of Rosa L. (Rosaceae)

  Kirov, I., Van Laere, K., Van Roy, N. & Khrustaleva, L., 4-Nov-2016, In: Comparative Cytogenetics. 10, 4, p. 543-554

  Research output: Contribution to journal › A1: Web of Science-article › peer-review
  2 Downloads (Pure)
• 2015

  Development of cytogenetic markers in Rosa

  Kirov, I., Van Laere, K., De Riek, J., De Keyser, E., Ruttink, T., Van Roy, N. & khrustaleva, L., 2015, 25th International Eucarpia Symposium, Section Ornamentals: Crossing Borders: Book of Abstracts. Van Huylenbroeck, J. & Dhooghe, E. (eds.). p. 28

  Research output: Chapter in Book/Report/Conference proceeding › C3: Conference Abstract › peer-review

• High resolution physical mapping of single gene fragments on pachytene chromosome 4 and 7 of Rosa

  Kirov, I., Van Laere, K. & Khrustaleva, L., 2015, In: BMC Genetics. 16, p. 74

  Research output: Contribution to journal › A1: Web of Science-article › peer-review

  File
  110 Downloads (Pure)

• Molecular cytogenetics in the genus Rosa: current status andfuture perspectives

  Kirov, I., Khrustaleva, L. I., Van Laere, K. & Van Roy, N., 2015, Proceedings of the XXVth International Eucarpia Symposium Section Ornamentals "Crossing Borders". Van Huylenbroeck, J. & Dhooghe, E. (eds.). Vol. 1087. p. 41-48 (Acta Horticulturae; no. 1087).

  Research output: Chapter in Book/Report/Conference proceeding › C1: Articles in proceedings › peer-review

  • protocols 100%
• 2014

  Anchoring linkage groups of the Rosa genetic map to physical chromosomes by means of Tyramide-FISH mapping of abiotic stress related genes

  Van Laere, K., Kirov, I., De Keyser, E., De Riek, J. & Khrustaleva, L., 14-Nov-2014.

  Research output: Contribution to conference › Poster

• Anchoring linkage groups of theRosa genetic map to physical chromosomes with tyramide-FISH and EST-SNP markers

  Kirov, I., Van Laere, K., De Riek, J., De Keyser, E., Van Roy, N. & Khrustaleva, L., 2014, In: PloS one. 9, 4, p. e95793 9 p.

  Research output: Contribution to journal › A1: Web of Science-article › peer-review

  • melting 100%
  • genetic markers 36%
  2 Downloads (Pure)

• Anchoring linkage groups of the Rosa genetic map to physical chromosomes with Tyramide-FISH and EST-SNP markers

  Van Laere, K., Kirov, I., De Riek, J., De Keyser, E., Van Roy, N. & Khrustaleva, L., 2014, Plant Molecular Cytogenetics in Genomic and Postgenomic Era - Abstract Book.

  Research output: Chapter in Book/Report/Conference proceeding › C3: Conference Abstract

• An easy "SteamDrop" method for high quality plant chromosome preparation

  Kirov, I., Divashuk, M., Van Laere, K., Oleg, A., Soloviev, A. & Khrustaleva, L., 2014, Plant Molecular Cytogenetics in a Genomic and Postgenomic Era - Abstract Book.

  Research output: Chapter in Book/Report/Conference proceeding › C3: Conference Abstract

• An easy “SteamDrop” method for high quality plant chromosome preparation

  Kirov, I., Divashuk, M., Van Laere, K., Soloviev, A. & Khrustaleva, L., 2014, In: Molecular Cytogenetics. 7, p. 21-30

  Research output: Contribution to journal › A1: Web of Science-article › peer-review

  3 Downloads (Pure)

• Population genetics in Rosa section Caninae based on AFLP markers and FISH-mapping of repetitive DNA sequences

  Van Laere, K., Nybom, H., Smulders, M. J. M. & De Riek, J., 14-Nov-2014.

  Research output: Contribution to conference › Poster

• The use of EST-SNP markers to integrate genetic and physical maps for Rosa wichurana.

  De Keyser, E., Kirov, I., Van Laere, K., Khrustaleva, L. & De Riek, J., 2014, Plant Gene Discovery & "Omics" Technologies: Programme and Abstracts. Wenen, p. 30 1 p.

  Research output: Chapter in Book/Report/Conference proceeding › C3: Conference Abstract › peer-review

  • melting 100%
  • protocols 69%
• 2013

  AFLP-based population genetics and FISH karyotyping with functional candidate genes for phylogeneticsin Rosa section Caninae

  Van Laere, K., Nybom, H., Smulders, M. J. M. & De Riek, J., 2013, Plant Genome Evolution Abstracts.

  Research output: Chapter in Book/Report/Conference proceeding › C3: Conference Abstract

• Integration of genetic and physical maps for Rosa wichurana using Tyramide-FISH

  Kirov, I., Van Laere, K., Khrustaleva, L., De Keyser, E. & De Riek, J., 2013, Sixth International Symposium on Rose Research and Cultivation: abstracts. Debener, T. (ed.). p. 19

  Research output: Chapter in Book/Report/Conference proceeding › C3: Conference Abstract

  • melting 100%
  • protocols 69%
  • genomics 61%

• Integration of genetic and physical maps of Rosa by means of Tyramide-FISH mapping of abiotic stress related genes

  Kirov, I., Van Laere, K. & Khrustaleva, L., 2013, Congress abstracts. 1 p.

  Research output: Chapter in Book/Report/Conference proceeding › C3: Conference Abstract

• Tyramid-FISH is a useful tool for cytogenetic mapping of genes in plant species with small and large chromosomes

  Kirov, I., Van Laere, K., Romanov, D., De Keyser, E., De Riek, J. & Khrustaleva, L., 2013, the 19th International Chromosome Conference, abstracts.

  Research output: Chapter in Book/Report/Conference proceeding › C3: Conference Abstract › peer-review
• 2011

  Cytogenetic mapping of candidate genes involved in drought resistance in a diploid Rosa wichurana x Rosa 'Yesterday' population using tyramide-FISH

  Van Laere, K., Kirov, I., De Keyser, E., Razavi, F., Khrustaleva, L. & Van Huylenbroeck, J., 2011.

  Research output: Contribution to conference › Published abstract › peer-review