Evaluation and optimization of a high-throughput sequencing based strategy to detect viruses and bacteria in view of certification and in vitro therapy to create virus free mother plants

Search results

• 2025

  HTS: The key to virus-free starting material

  Dewitte, I., De Jonghe, K., Heyneman, M., Werbrouck, S. & Guldentops, E., 2025.

  Research output: Contribution to conference › Poster

  4 Downloads (Pure)

• HTS: The key to virus-free starting material

  Dewitte, I., De Jonghe, K., Heyneman, M., Werbrouck, S. & Guldentops, E., 2025.

  Research output: Contribution to conference › Poster

  3 Downloads (Pure)

• 2023

  Assessment of ONT sequencing (MinION) for plant virus detection and comparison with Illumina-based sequencing

  Guldentops, E., Heyneman, M., Werbrouck, S. & De Jonghe, K., 9-Jul-2023.

  Research output: Contribution to conference › Poster

• Assessment of ONT sequencing (MinIon) for plant virus detection and comparison with Illumina-based sequencing.

  Guldentops, E., Heyneman, M., Werbrouck, S. & De Jonghe, K., 23-Aug-2023.

  Research output: Contribution to conference › Poster

• Revisiting high throughput sequencing data used for plant virus detection in order to find evidence of non-viral plant pathogens and pests

  Haegeman, A., Foucart, Y., Goedefroit, T., De Jonghe, K., Al Rwahnih, M., Candresse, T., Gaafar, Y., Hurtado-Gonzales, O., Kogej, Z., Kutnjak, D., Lamovsek, J., Lefebvre, M., Malapi-Wight, M., Mavric-Plesko, I., Onder, S., Reynard, J.-S., Pamblanco Salavert, F., Schumpp, O., Stevens, K. & Pal, C. & 7 others, Tamisier, L., Ulubas Serce, C., Van Duivenbode, I., Waite, D., Xiaojun, H., Ziebell, H. & Massart, S., 21-Aug-2023.

  Research output: Contribution to conference › Poster

• 2022

  Detection of plant viruses with high-throughput sequencing and in vitro elimination of detected viruses in Dioscorea spp.

  Guldentops, E., Mihaylova , A., De Vos, C., Foucart, Y., Ben Ghozlen, H., Pupo, J. S., De Jonghe, K. & Werbrouck, S., Aug-2022.

  Research output: Contribution to conference › Poster

• 2021

  Raising awareness among plant virologists on the richness of their high-throughput sequencing data

  Haegeman, A., Foucart, Y., Goedefroit, T., De Jonghe, K., Al Rwahnih, M., Candresse, T., Gaafar, Y., Hurtado-Gonzales, O., Kogej, Z., Kutnjak, D., Lamovsek, J., Lefebvre, M., Malapi-Wight, M., Mavric-Plesko, I., Onder, S., Reynard, J.-S., Pamblanco Salavert, F., Schumpp, O., Stevens, K. & Pal, C. & 7 others, Tamisier, L., Ulubas Serce, C., Van Duivenbode, I., Waite, D., Xiaojun, H., Ziebell, H. & Massart, S., 20-Apr-2021.

  Research output: Contribution to conference › Poster

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  48 Downloads (Pure)

• Semi-artificial datasets as a resource for validation of bioinformatics pipelines for plant virus detection

  Tamisier, L., Foucart, Y., Haegeman, A., Fouillien, N., Al Rwahnih, M., Candresse, T., Chiumenti, M., De Jonghe, K., Lefebre, M., Margaria, P., Reynard, J.-S., Stevens, K., Kutnjak, D. & Massart, S., 21-Apr-2021.

  Research output: Contribution to conference › Poster