Standardizing the nomenclature for clonal lineages of the sudden oak death pathogen, Phytophthora ramorum

Niklaus J Grünwald; Erica M Goss; Kelly Ivors; Matteo Garbelotto; Frank N Martin; Simone Prospero; Everett Hansen; Peter J M Bonants; Richard C Hamelin; Gary Chastagner; Sabine Werres; David M Rizzo; Gloria Abad; Paul Beales; Guillaume J Bilodeau; Cheryl L Blomquist; Clive Brasier; Stephan C Brière; Anne Chandelier; Jennifer M Davidson; Sandra Denman; Marianne Elliott; Susan J Frankel; Ellen M Goheen; Hans de Gruyter; Kurt Heungens; Delano James; Alan Kanaskie; Michael G McWilliams; Willem Man in 't Veld; Eduardo Moralejo; Nancy K Osterbauer; Mary E Palm; Jennifer L Parke; Ana Maria Perez Sierra; Simon F Shamoun; Nina Shishkoff; Paul W Tooley; Anna Maria Vettraino; Joan Webber; Timothy L Widmer

doi:10.1094/PHYTO-99-7-0792

Standardizing the nomenclature for clonal lineages of the sudden oak death pathogen, Phytophthora ramorum

Niklaus J Grünwald, Erica M Goss, Kelly Ivors, Matteo Garbelotto, Frank N Martin, Simone Prospero, Everett Hansen, Peter J M Bonants, Richard C Hamelin, Gary Chastagner, Sabine Werres, David M Rizzo, Gloria Abad, Paul Beales, Guillaume J Bilodeau, Cheryl L Blomquist, Clive Brasier, Stephan C Brière, Anne Chandelier, Jennifer M DavidsonSandra Denman, Marianne Elliott, Susan J Frankel, Ellen M Goheen, Hans de Gruyter, Kurt Heungens, Delano James, Alan Kanaskie, Michael G McWilliams, Willem Man in 't Veld, Eduardo Moralejo, Nancy K Osterbauer, Mary E Palm, Jennifer L Parke, Ana Maria Perez Sierra, Simon F Shamoun, Nina Shishkoff, Paul W Tooley, Anna Maria Vettraino, Joan Webber, Timothy L Widmer

Onderzoeksoutput: Bijdrage aan tijdschrift › A1: Web of Science-artikel › peer review

Uittreksel

Phytophthora ramorum, the causal agent of sudden oak death and ramorum blight, is known to exist as three distinct clonal lineages which can only be distinguished by performing molecular marker-based analyses. However, in the recent literature there exists no consensus on naming of these lineages. Here we propose a system for naming clonal lineages of P. ramorum based on a consensus established by the P. ramorum research community. Clonal lineages are named with a two letter identifier for the continent on which they were first found (e.g., NA = North America; EU = Europe) followed by a number indicating order of appearance. Clonal lineages known to date are designated NA1 (mating type: A2; distribution: North America; environment: forest and nurseries), NA2 (A2; North America; nurseries), and EU1 (predominantly A1, rarely A2; Europe and North America; nurseries and gardens). It is expected that novel lineages or new variants within the existing three clonal lineages could in time emerge.

Oorspronkelijke taal	Engels
Tijdschrift	Phytopahology
Volume	99
Exemplaarnummer	7
Pagina's (van-tot)	792-5
Aantal pagina’s	4
ISSN	0031-949X
DOI's	https://doi.org/10.1094/PHYTO-99-7-0792
Publicatiestatus	Gepubliceerd - 2009

Toegang verkrijgen tot document

10.1094/PHYTO-99-7-0792

Dit citeren

Grünwald, N. J., Goss, E. M., Ivors, K., Garbelotto, M., Martin, F. N., Prospero, S., Hansen, E., Bonants, P. J. M., Hamelin, R. C., Chastagner, G., Werres, S., Rizzo, D. M., Abad, G., Beales, P., Bilodeau, G. J., Blomquist, C. L., Brasier, C., Brière, S. C., Chandelier, A., ... Widmer, T. L. (2009). Standardizing the nomenclature for clonal lineages of the sudden oak death pathogen, Phytophthora ramorum. Phytopahology, 99(7), 792-5. https://doi.org/10.1094/PHYTO-99-7-0792

@article{8159b98b9bd64a2bbf3c408aeda14467,

title = "Standardizing the nomenclature for clonal lineages of the sudden oak death pathogen, Phytophthora ramorum",

abstract = "Phytophthora ramorum, the causal agent of sudden oak death and ramorum blight, is known to exist as three distinct clonal lineages which can only be distinguished by performing molecular marker-based analyses. However, in the recent literature there exists no consensus on naming of these lineages. Here we propose a system for naming clonal lineages of P. ramorum based on a consensus established by the P. ramorum research community. Clonal lineages are named with a two letter identifier for the continent on which they were first found (e.g., NA = North America; EU = Europe) followed by a number indicating order of appearance. Clonal lineages known to date are designated NA1 (mating type: A2; distribution: North America; environment: forest and nurseries), NA2 (A2; North America; nurseries), and EU1 (predominantly A1, rarely A2; Europe and North America; nurseries and gardens). It is expected that novel lineages or new variants within the existing three clonal lineages could in time emerge.",

keywords = "Clone Cells, Genotype, Geography, Phylogeny, Phytophthora, Plant Diseases, Quercus, Terminology as Topic",

author = "Gr{\"u}nwald, {Niklaus J} and Goss, {Erica M} and Kelly Ivors and Matteo Garbelotto and Martin, {Frank N} and Simone Prospero and Everett Hansen and Bonants, {Peter J M} and Hamelin, {Richard C} and Gary Chastagner and Sabine Werres and Rizzo, {David M} and Gloria Abad and Paul Beales and Bilodeau, {Guillaume J} and Blomquist, {Cheryl L} and Clive Brasier and Bri{\`e}re, {Stephan C} and Anne Chandelier and Davidson, {Jennifer M} and Sandra Denman and Marianne Elliott and Frankel, {Susan J} and Goheen, {Ellen M} and {de Gruyter}, Hans and Kurt Heungens and Delano James and Alan Kanaskie and McWilliams, {Michael G} and {Man in 't Veld}, Willem and Eduardo Moralejo and Osterbauer, {Nancy K} and Palm, {Mary E} and Parke, {Jennifer L} and Sierra, {Ana Maria Perez} and Shamoun, {Simon F} and Nina Shishkoff and Tooley, {Paul W} and Vettraino, {Anna Maria} and Joan Webber and Widmer, {Timothy L}",

year = "2009",

doi = "10.1094/PHYTO-99-7-0792",

language = "English",

volume = "99",

pages = "792--5",

journal = "Phytopathology",

issn = "0031-949X",

publisher = "AMER PHYTOPATHOLOGICAL SOC",

number = "7",

}

Grünwald, NJ, Goss, EM, Ivors, K, Garbelotto, M, Martin, FN, Prospero, S, Hansen, E, Bonants, PJM, Hamelin, RC, Chastagner, G, Werres, S, Rizzo, DM, Abad, G, Beales, P, Bilodeau, GJ, Blomquist, CL, Brasier, C, Brière, SC, Chandelier, A, Davidson, JM, Denman, S, Elliott, M, Frankel, SJ, Goheen, EM, de Gruyter, H, Heungens, K, James, D, Kanaskie, A, McWilliams, MG, Man in 't Veld, W, Moralejo, E, Osterbauer, NK, Palm, ME, Parke, JL, Sierra, AMP, Shamoun, SF, Shishkoff, N, Tooley, PW, Vettraino, AM, Webber, J & Widmer, TL 2009, 'Standardizing the nomenclature for clonal lineages of the sudden oak death pathogen, Phytophthora ramorum', Phytopahology, vol. 99, nr. 7, blz. 792-5. https://doi.org/10.1094/PHYTO-99-7-0792

TY - JOUR

T1 - Standardizing the nomenclature for clonal lineages of the sudden oak death pathogen, Phytophthora ramorum

AU - Grünwald, Niklaus J

AU - Goss, Erica M

AU - Ivors, Kelly

AU - Garbelotto, Matteo

AU - Martin, Frank N

AU - Prospero, Simone

AU - Hansen, Everett

AU - Bonants, Peter J M

AU - Hamelin, Richard C

AU - Chastagner, Gary

AU - Werres, Sabine

AU - Rizzo, David M

AU - Abad, Gloria

AU - Beales, Paul

AU - Bilodeau, Guillaume J

AU - Blomquist, Cheryl L

AU - Brasier, Clive

AU - Brière, Stephan C

AU - Chandelier, Anne

AU - Davidson, Jennifer M

AU - Denman, Sandra

AU - Elliott, Marianne

AU - Frankel, Susan J

AU - Goheen, Ellen M

AU - de Gruyter, Hans

AU - Heungens, Kurt

AU - James, Delano

AU - Kanaskie, Alan

AU - McWilliams, Michael G

AU - Man in 't Veld, Willem

AU - Moralejo, Eduardo

AU - Osterbauer, Nancy K

AU - Palm, Mary E

AU - Parke, Jennifer L

AU - Sierra, Ana Maria Perez

AU - Shamoun, Simon F

AU - Shishkoff, Nina

AU - Tooley, Paul W

AU - Vettraino, Anna Maria

AU - Webber, Joan

AU - Widmer, Timothy L

PY - 2009

Y1 - 2009

N2 - Phytophthora ramorum, the causal agent of sudden oak death and ramorum blight, is known to exist as three distinct clonal lineages which can only be distinguished by performing molecular marker-based analyses. However, in the recent literature there exists no consensus on naming of these lineages. Here we propose a system for naming clonal lineages of P. ramorum based on a consensus established by the P. ramorum research community. Clonal lineages are named with a two letter identifier for the continent on which they were first found (e.g., NA = North America; EU = Europe) followed by a number indicating order of appearance. Clonal lineages known to date are designated NA1 (mating type: A2; distribution: North America; environment: forest and nurseries), NA2 (A2; North America; nurseries), and EU1 (predominantly A1, rarely A2; Europe and North America; nurseries and gardens). It is expected that novel lineages or new variants within the existing three clonal lineages could in time emerge.

AB - Phytophthora ramorum, the causal agent of sudden oak death and ramorum blight, is known to exist as three distinct clonal lineages which can only be distinguished by performing molecular marker-based analyses. However, in the recent literature there exists no consensus on naming of these lineages. Here we propose a system for naming clonal lineages of P. ramorum based on a consensus established by the P. ramorum research community. Clonal lineages are named with a two letter identifier for the continent on which they were first found (e.g., NA = North America; EU = Europe) followed by a number indicating order of appearance. Clonal lineages known to date are designated NA1 (mating type: A2; distribution: North America; environment: forest and nurseries), NA2 (A2; North America; nurseries), and EU1 (predominantly A1, rarely A2; Europe and North America; nurseries and gardens). It is expected that novel lineages or new variants within the existing three clonal lineages could in time emerge.

KW - Clone Cells

KW - Genotype

KW - Geography

KW - Phylogeny

KW - Phytophthora

KW - Plant Diseases

KW - Quercus

KW - Terminology as Topic

U2 - 10.1094/PHYTO-99-7-0792

DO - 10.1094/PHYTO-99-7-0792

M3 - A1: Web of Science-article

C2 - 19522576

SN - 0031-949X

VL - 99

SP - 792

EP - 795

JO - Phytopathology

JF - Phytopathology

IS - 7

ER -

Standardizing the nomenclature for clonal lineages of the sudden oak death pathogen, Phytophthora ramorum

Uittreksel

Toegang verkrijgen tot document

Vingerafdruk

Dit citeren