Standardizing the nomenclature for clonal lineages of the sudden oak death pathogen, Phytophthora ramorum

Niklaus J Grünwald; Erica M Goss; Kelly Ivors; Matteo Garbelotto; Frank N Martin; Simone Prospero; Everett Hansen; Peter J M Bonants; Richard C Hamelin; Gary Chastagner; Sabine Werres; David M Rizzo; Gloria Abad; Paul Beales; Guillaume J Bilodeau; Cheryl L Blomquist; Clive Brasier; Stephan C Brière; Anne Chandelier; Jennifer M Davidson; Sandra Denman; Marianne Elliott; Susan J Frankel; Ellen M Goheen; Hans de Gruyter; Kurt Heungens; Delano James; Alan Kanaskie; Michael G McWilliams; Willem Man in 't Veld; Eduardo Moralejo; Nancy K Osterbauer; Mary E Palm; Jennifer L Parke; Ana Maria Perez Sierra; Simon F Shamoun; Nina Shishkoff; Paul W Tooley; Anna Maria Vettraino; Joan Webber; Timothy L Widmer

doi:10.1094/PHYTO-99-7-0792

Standardizing the nomenclature for clonal lineages of the sudden oak death pathogen, Phytophthora ramorum

Niklaus J Grünwald, Erica M Goss, Kelly Ivors, Matteo Garbelotto, Frank N Martin, Simone Prospero, Everett Hansen, Peter J M Bonants, Richard C Hamelin, Gary Chastagner, Sabine Werres, David M Rizzo, Gloria Abad, Paul Beales, Guillaume J Bilodeau, Cheryl L Blomquist, Clive Brasier, Stephan C Brière, Anne Chandelier, Jennifer M DavidsonSandra Denman, Marianne Elliott, Susan J Frankel, Ellen M Goheen, Hans de Gruyter, Kurt Heungens, Delano James, Alan Kanaskie, Michael G McWilliams, Willem Man in 't Veld, Eduardo Moralejo, Nancy K Osterbauer, Mary E Palm, Jennifer L Parke, Ana Maria Perez Sierra, Simon F Shamoun, Nina Shishkoff, Paul W Tooley, Anna Maria Vettraino, Joan Webber, Timothy L Widmer

Onderzoeksoutput: Bijdrage aan tijdschrift › A1: Web of Science-artikel › peer review

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Phytophthora ramorum, the causal agent of sudden oak death and ramorum blight, is known to exist as three distinct clonal lineages which can only be distinguished by performing molecular marker-based analyses. However, in the recent literature there exists no consensus on naming of these lineages. Here we propose a system for naming clonal lineages of P. ramorum based on a consensus established by the P. ramorum research community. Clonal lineages are named with a two letter identifier for the continent on which they were first found (e.g., NA = North America; EU = Europe) followed by a number indicating order of appearance. Clonal lineages known to date are designated NA1 (mating type: A2; distribution: North America; environment: forest and nurseries), NA2 (A2; North America; nurseries), and EU1 (predominantly A1, rarely A2; Europe and North America; nurseries and gardens). It is expected that novel lineages or new variants within the existing three clonal lineages could in time emerge.

Oorspronkelijke taal	Engels
Tijdschrift	Phytopahology
Volume	99
Exemplaarnummer	7
Pagina's (van-tot)	792-5
Aantal pagina’s	4
ISSN	0031-949X
DOI's	https://doi.org/10.1094/PHYTO-99-7-0792
Publicatiestatus	Gepubliceerd - 2009

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10.1094/PHYTO-99-7-0792

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Grünwald, N. J., Goss, E. M., Ivors, K., Garbelotto, M., Martin, F. N., Prospero, S., Hansen, E., Bonants, P. J. M., Hamelin, R. C., Chastagner, G., Werres, S., Rizzo, D. M., Abad, G., Beales, P., Bilodeau, G. J., Blomquist, C. L., Brasier, C., Brière, S. C., Chandelier, A., ... Widmer, T. L. (2009). Standardizing the nomenclature for clonal lineages of the sudden oak death pathogen, Phytophthora ramorum. Phytopahology, 99(7), 792-5. https://doi.org/10.1094/PHYTO-99-7-0792

@article{8159b98b9bd64a2bbf3c408aeda14467,

title = "Standardizing the nomenclature for clonal lineages of the sudden oak death pathogen, Phytophthora ramorum",

abstract = "Phytophthora ramorum, the causal agent of sudden oak death and ramorum blight, is known to exist as three distinct clonal lineages which can only be distinguished by performing molecular marker-based analyses. However, in the recent literature there exists no consensus on naming of these lineages. Here we propose a system for naming clonal lineages of P. ramorum based on a consensus established by the P. ramorum research community. Clonal lineages are named with a two letter identifier for the continent on which they were first found (e.g., NA = North America; EU = Europe) followed by a number indicating order of appearance. Clonal lineages known to date are designated NA1 (mating type: A2; distribution: North America; environment: forest and nurseries), NA2 (A2; North America; nurseries), and EU1 (predominantly A1, rarely A2; Europe and North America; nurseries and gardens). It is expected that novel lineages or new variants within the existing three clonal lineages could in time emerge.",

keywords = "Clone Cells, Genotype, Geography, Phylogeny, Phytophthora, Plant Diseases, Quercus, Terminology as Topic",

author = "Gr{\"u}nwald, {Niklaus J} and Goss, {Erica M} and Kelly Ivors and Matteo Garbelotto and Martin, {Frank N} and Simone Prospero and Everett Hansen and Bonants, {Peter J M} and Hamelin, {Richard C} and Gary Chastagner and Sabine Werres and Rizzo, {David M} and Gloria Abad and Paul Beales and Bilodeau, {Guillaume J} and Blomquist, {Cheryl L} and Clive Brasier and Bri{\`e}re, {Stephan C} and Anne Chandelier and Davidson, {Jennifer M} and Sandra Denman and Marianne Elliott and Frankel, {Susan J} and Goheen, {Ellen M} and {de Gruyter}, Hans and Kurt Heungens and Delano James and Alan Kanaskie and McWilliams, {Michael G} and {Man in 't Veld}, Willem and Eduardo Moralejo and Osterbauer, {Nancy K} and Palm, {Mary E} and Parke, {Jennifer L} and Sierra, {Ana Maria Perez} and Shamoun, {Simon F} and Nina Shishkoff and Tooley, {Paul W} and Vettraino, {Anna Maria} and Joan Webber and Widmer, {Timothy L}",

year = "2009",

doi = "10.1094/PHYTO-99-7-0792",

language = "English",

volume = "99",

pages = "792--5",

journal = "Phytopahology",

issn = "0031-949X",

publisher = "AMER PHYTOPATHOLOGICAL SOC",

number = "7",

}

Grünwald, NJ, Goss, EM, Ivors, K, Garbelotto, M, Martin, FN, Prospero, S, Hansen, E, Bonants, PJM, Hamelin, RC, Chastagner, G, Werres, S, Rizzo, DM, Abad, G, Beales, P, Bilodeau, GJ, Blomquist, CL, Brasier, C, Brière, SC, Chandelier, A, Davidson, JM, Denman, S, Elliott, M, Frankel, SJ, Goheen, EM, de Gruyter, H, Heungens, K, James, D, Kanaskie, A, McWilliams, MG, Man in 't Veld, W, Moralejo, E, Osterbauer, NK, Palm, ME, Parke, JL, Sierra, AMP, Shamoun, SF, Shishkoff, N, Tooley, PW, Vettraino, AM, Webber, J & Widmer, TL 2009, 'Standardizing the nomenclature for clonal lineages of the sudden oak death pathogen, Phytophthora ramorum', Phytopahology, vol. 99, nr. 7, blz. 792-5. https://doi.org/10.1094/PHYTO-99-7-0792

TY - JOUR

T1 - Standardizing the nomenclature for clonal lineages of the sudden oak death pathogen, Phytophthora ramorum

AU - Grünwald, Niklaus J

AU - Goss, Erica M

AU - Ivors, Kelly

AU - Garbelotto, Matteo

AU - Martin, Frank N

AU - Prospero, Simone

AU - Hansen, Everett

AU - Bonants, Peter J M

AU - Hamelin, Richard C

AU - Chastagner, Gary

AU - Werres, Sabine

AU - Rizzo, David M

AU - Abad, Gloria

AU - Beales, Paul

AU - Bilodeau, Guillaume J

AU - Blomquist, Cheryl L

AU - Brasier, Clive

AU - Brière, Stephan C

AU - Chandelier, Anne

AU - Davidson, Jennifer M

AU - Denman, Sandra

AU - Elliott, Marianne

AU - Frankel, Susan J

AU - Goheen, Ellen M

AU - de Gruyter, Hans

AU - Heungens, Kurt

AU - James, Delano

AU - Kanaskie, Alan

AU - McWilliams, Michael G

AU - Man in 't Veld, Willem

AU - Moralejo, Eduardo

AU - Osterbauer, Nancy K

AU - Palm, Mary E

AU - Parke, Jennifer L

AU - Sierra, Ana Maria Perez

AU - Shamoun, Simon F

AU - Shishkoff, Nina

AU - Tooley, Paul W

AU - Vettraino, Anna Maria

AU - Webber, Joan

AU - Widmer, Timothy L

PY - 2009

Y1 - 2009

N2 - Phytophthora ramorum, the causal agent of sudden oak death and ramorum blight, is known to exist as three distinct clonal lineages which can only be distinguished by performing molecular marker-based analyses. However, in the recent literature there exists no consensus on naming of these lineages. Here we propose a system for naming clonal lineages of P. ramorum based on a consensus established by the P. ramorum research community. Clonal lineages are named with a two letter identifier for the continent on which they were first found (e.g., NA = North America; EU = Europe) followed by a number indicating order of appearance. Clonal lineages known to date are designated NA1 (mating type: A2; distribution: North America; environment: forest and nurseries), NA2 (A2; North America; nurseries), and EU1 (predominantly A1, rarely A2; Europe and North America; nurseries and gardens). It is expected that novel lineages or new variants within the existing three clonal lineages could in time emerge.

AB - Phytophthora ramorum, the causal agent of sudden oak death and ramorum blight, is known to exist as three distinct clonal lineages which can only be distinguished by performing molecular marker-based analyses. However, in the recent literature there exists no consensus on naming of these lineages. Here we propose a system for naming clonal lineages of P. ramorum based on a consensus established by the P. ramorum research community. Clonal lineages are named with a two letter identifier for the continent on which they were first found (e.g., NA = North America; EU = Europe) followed by a number indicating order of appearance. Clonal lineages known to date are designated NA1 (mating type: A2; distribution: North America; environment: forest and nurseries), NA2 (A2; North America; nurseries), and EU1 (predominantly A1, rarely A2; Europe and North America; nurseries and gardens). It is expected that novel lineages or new variants within the existing three clonal lineages could in time emerge.

KW - Clone Cells

KW - Genotype

KW - Geography

KW - Phylogeny

KW - Phytophthora

KW - Plant Diseases

KW - Quercus

KW - Terminology as Topic

U2 - 10.1094/PHYTO-99-7-0792

DO - 10.1094/PHYTO-99-7-0792

M3 - A1: Web of Science-article

C2 - 19522576

SN - 0031-949X

VL - 99

SP - 792

EP - 795

JO - Phytopahology

JF - Phytopahology

IS - 7

ER -

Standardizing the nomenclature for clonal lineages of the sudden oak death pathogen, Phytophthora ramorum

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